Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC160980.2-201ENSMUST00000225131 949 ntBASIC8.83□□□□□ -1
Cux1P53564 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cux1P53564 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.83□□□□□ -1
Cux1P53564 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cux1P53564 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cux1P53564 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Cux1P53564 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Cux1P53564 Gm9429-201ENSMUST00000117804 868 ntBASIC8.82□□□□□ -1
Cux1P53564 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC8.82□□□□□ -1
Cux1P53564 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC8.82□□□□□ -1
Cux1P53564 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC8.82□□□□□ -1
Cux1P53564 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC8.82□□□□□ -1
Cux1P53564 Gm9278-201ENSMUST00000205508 553 ntBASIC8.82□□□□□ -1
Cux1P53564 Gm18468-201ENSMUST00000207321 369 ntBASIC8.82□□□□□ -1
Cux1P53564 Gm18470-201ENSMUST00000207467 420 ntBASIC8.82□□□□□ -1
Cux1P53564 Gm18465-201ENSMUST00000207468 369 ntBASIC8.82□□□□□ -1
Cux1P53564 Gm18464-201ENSMUST00000207803 420 ntBASIC8.82□□□□□ -1
Cux1P53564 Gm18458-201ENSMUST00000207908 369 ntBASIC8.82□□□□□ -1
Cux1P53564 Gm18461-201ENSMUST00000208421 420 ntBASIC8.82□□□□□ -1
Cux1P53564 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.82□□□□□ -1
Cux1P53564 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Cux1P53564 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cux1P53564 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cux1P53564 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC8.82□□□□□ -1
Cux1P53564 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Cux1P53564 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cux1P53564 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cux1P53564 Gm44735-201ENSMUST00000206197 1752 ntBASIC8.82□□□□□ -1
Cux1P53564 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cux1P53564 Gm37474-201ENSMUST00000194812 1814 ntBASIC8.81□□□□□ -1
Cux1P53564 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Gm42923-201ENSMUST00000198438 2896 ntBASIC8.81□□□□□ -1
Cux1P53564 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.81□□□□□ -1
Cux1P53564 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Gm15754-201ENSMUST00000119191 478 ntBASIC8.81□□□□□ -1
Cux1P53564 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Gm23965-201ENSMUST00000157969 142 ntBASIC8.81□□□□□ -1
Cux1P53564 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Gm27754-201ENSMUST00000183340 126 ntBASIC8.81□□□□□ -1
Cux1P53564 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC8.81□□□□□ -1
Cux1P53564 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cux1P53564 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC8.81□□□□□ -1
Cux1P53564 Gm5457-201ENSMUST00000022260 333 ntBASIC8.81□□□□□ -1
Cux1P53564 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC8.81□□□□□ -1
Cux1P53564 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cux1P53564 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cux1P53564 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC8.81□□□□□ -1
Cux1P53564 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC8.81□□□□□ -1
Cux1P53564 AC164297.2-201ENSMUST00000224388 1508 ntBASIC8.81□□□□□ -1
Cux1P53564 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cux1P53564 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cux1P53564 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cux1P53564 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cux1P53564 Gm7316-201ENSMUST00000165395 445 ntBASIC8.8□□□□□ -1
Cux1P53564 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC8.8□□□□□ -1
Cux1P53564 Gm44580-201ENSMUST00000206333 877 ntBASIC8.8□□□□□ -1
Cux1P53564 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC8.8□□□□□ -1
Cux1P53564 AC117240.2-201ENSMUST00000220921 263 ntBASIC8.8□□□□□ -1
Cux1P53564 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Cux1P53564 Gm20287-201ENSMUST00000172848 2367 ntBASIC8.8□□□□□ -1
Cux1P53564 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cux1P53564 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cux1P53564 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cux1P53564 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cux1P53564 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC8.8□□□□□ -1
Cux1P53564 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cux1P53564 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cux1P53564 Gm42540-201ENSMUST00000200319 2008 ntBASIC8.8□□□□□ -1
Cux1P53564 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC8.8□□□□□ -1
Cux1P53564 Gm20453-201ENSMUST00000173968 226 ntBASIC8.8□□□□□ -1
Cux1P53564 Gm4831-201ENSMUST00000174626 594 ntBASIC8.8□□□□□ -1
Cux1P53564 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC8.8□□□□□ -1
Cux1P53564 Gm45908-201ENSMUST00000212977 1177 ntBASIC8.8□□□□□ -1
Cux1P53564 n-R5s13-201ENSMUST00000093707 119 ntBASIC8.8□□□□□ -1
Cux1P53564 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cux1P53564 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Gm11743-201ENSMUST00000117385 1735 ntBASIC8.79□□□□□ -1
Cux1P53564 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cux1P53564 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cux1P53564 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms