Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.81□□□□□ -1.16
Rfx1P48377 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm11545-201ENSMUST00000146507 375 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm22915-201ENSMUST00000157615 136 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm24176-201ENSMUST00000158928 121 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm25525-201ENSMUST00000177701 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm26178-201ENSMUST00000177706 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm26465-201ENSMUST00000178517 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm24317-201ENSMUST00000178536 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm25021-201ENSMUST00000179184 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm22995-201ENSMUST00000179670 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm24424-201ENSMUST00000179714 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm24389-201ENSMUST00000179962 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm25672-201ENSMUST00000180111 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm21392-201ENSMUST00000182950 972 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm27225-201ENSMUST00000183833 557 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm27178-201ENSMUST00000184962 340 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm29163-201ENSMUST00000188029 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm28191-201ENSMUST00000189112 211 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm43659-201ENSMUST00000200894 628 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm44919-201ENSMUST00000208587 1073 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm19196-201ENSMUST00000209258 357 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm18252-203ENSMUST00000215855 757 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
Rfx1P48377 AC130823.2-201ENSMUST00000226169 290 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Rfx1P48377 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm23628-201ENSMUST00000082464 173 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm25587-201ENSMUST00000082498 166 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm23815-201ENSMUST00000083231 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm23520-201ENSMUST00000093736 107 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Rfx1P48377 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Rfx1P48377 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
Rfx1P48377 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm43771-201ENSMUST00000202931 1578 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Rfx1P48377 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 AC158605.3-201ENSMUST00000218999 2538 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm12447-201ENSMUST00000119110 470 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm13900-201ENSMUST00000119402 498 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm9085-201ENSMUST00000119994 1072 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm12825-201ENSMUST00000120249 563 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm14070-201ENSMUST00000120773 428 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm12903-201ENSMUST00000121015 544 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm15586-201ENSMUST00000121218 528 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm15242-201ENSMUST00000122459 283 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rfx1P48377 Gm26182-201ENSMUST00000157688 116 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm22523-201ENSMUST00000158696 100 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm7502-201ENSMUST00000169235 733 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Mir6367-201ENSMUST00000183385 102 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm18727-201ENSMUST00000185981 553 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rfx1P48377 Ighv1-41-201ENSMUST00000194414 329 ntBASIC7.8□□□□□ -1.16
Rfx1P48377 Gm43556-201ENSMUST00000196186 681 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms