Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm26595-201ENSMUST00000181585 484 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Gm44463-201ENSMUST00000198895 137 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.9□□□□□ -1.3
Traf1P39428 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Gm44582-201ENSMUST00000209125 445 ntBASIC6.9□□□□□ -1.3
Traf1P39428 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.9□□□□□ -1.3
Traf1P39428 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.9□□□□□ -1.3
Traf1P39428 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.9□□□□□ -1.3
Traf1P39428 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.9□□□□□ -1.3
Traf1P39428 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Traf1P39428 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Traf1P39428 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Traf1P39428 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Traf1P39428 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.9□□□□□ -1.3
Traf1P39428 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Traf1P39428 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.9□□□□□ -1.31
Traf1P39428 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Traf1P39428 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.9□□□□□ -1.31
Traf1P39428 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Traf1P39428 BC055308-201ENSMUST00000193380 2538 ntBASIC6.9□□□□□ -1.31
Traf1P39428 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.9□□□□□ -1.31
Traf1P39428 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.9□□□□□ -1.31
Traf1P39428 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.9□□□□□ -1.31
Traf1P39428 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Traf1P39428 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Traf1P39428 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Traf1P39428 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.89□□□□□ -1.31
Traf1P39428 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Traf1P39428 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.89□□□□□ -1.31
Traf1P39428 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.89□□□□□ -1.31
Traf1P39428 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Traf1P39428 Gm15078-201ENSMUST00000118371 782 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm8545-201ENSMUST00000120692 801 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm16139-201ENSMUST00000160015 420 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.89□□□□□ -1.31
Traf1P39428 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Gm43655-201ENSMUST00000197367 222 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm4742-201ENSMUST00000200261 771 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm7181-201ENSMUST00000202197 434 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm6070-201ENSMUST00000207275 419 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Traf1P39428 Gm3785-201ENSMUST00000221000 202 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm18413-201ENSMUST00000221573 655 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Traf1P39428 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Traf1P39428 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Traf1P39428 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Traf1P39428 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.89□□□□□ -1.31
Traf1P39428 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Traf1P39428 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Traf1P39428 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Traf1P39428 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm22867-201ENSMUST00000157499 109 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm26169-201ENSMUST00000158420 135 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Traf1P39428 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Traf1P39428 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.88□□□□□ -1.31
Traf1P39428 Gm24957-201ENSMUST00000179604 132 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm7745-201ENSMUST00000182235 973 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.88□□□□□ -1.31
Traf1P39428 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm43222-201ENSMUST00000199013 603 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.88□□□□□ -1.31
Traf1P39428 Gm3800-201ENSMUST00000221086 554 ntBASIC6.88□□□□□ -1.31
Traf1P39428 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.88□□□□□ -1.31
Traf1P39428 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Traf1P39428 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms