Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LdlrP35951 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.22□□□□□ -1.41
LdlrP35951 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LdlrP35951 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.22□□□□□ -1.41
LdlrP35951 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LdlrP35951 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LdlrP35951 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LdlrP35951 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LdlrP35951 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
LdlrP35951 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LdlrP35951 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.21□□□□□ -1.41
LdlrP35951 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
LdlrP35951 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.21□□□□□ -1.41
LdlrP35951 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
LdlrP35951 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.21□□□□□ -1.41
LdlrP35951 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
LdlrP35951 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LdlrP35951 Gm14854-201ENSMUST00000117758 841 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm15361-201ENSMUST00000119320 444 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm12307-201ENSMUST00000120581 590 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm23426-201ENSMUST00000122483 318 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.21□□□□□ -1.42
LdlrP35951 Gm23897-201ENSMUST00000158110 158 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm26037-201ENSMUST00000158150 311 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.21□□□□□ -1.42
LdlrP35951 Gm8604-201ENSMUST00000183150 965 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm18356-201ENSMUST00000185677 623 ntBASIC6.21□□□□□ -1.42
LdlrP35951 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.21□□□□□ -1.42
LdlrP35951 Gm44163-201ENSMUST00000205140 475 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.21□□□□□ -1.42
LdlrP35951 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LdlrP35951 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
LdlrP35951 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.21□□□□□ -1.42
LdlrP35951 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.21□□□□□ -1.42
LdlrP35951 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
LdlrP35951 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LdlrP35951 Gm10704-201ENSMUST00000098952 730 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.21□□□□□ -1.42
LdlrP35951 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.21□□□□□ -1.42
LdlrP35951 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.21□□□□□ -1.42
LdlrP35951 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LdlrP35951 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.2□□□□□ -1.42
LdlrP35951 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.2□□□□□ -1.42
LdlrP35951 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LdlrP35951 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.2□□□□□ -1.42
LdlrP35951 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Gm14018-201ENSMUST00000119042 455 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm16511-201ENSMUST00000120019 564 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm7212-201ENSMUST00000120817 348 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm14463-201ENSMUST00000121117 498 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.2□□□□□ -1.42
LdlrP35951 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.2□□□□□ -1.42
LdlrP35951 Gm2959-201ENSMUST00000169844 621 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Olfr331-202ENSMUST00000170501 957 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm23633-201ENSMUST00000175293 119 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC6.2□□□□□ -1.42
LdlrP35951 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm28527-201ENSMUST00000185210 297 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm28614-201ENSMUST00000186483 458 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.2□□□□□ -1.42
LdlrP35951 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LdlrP35951 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.2□□□□□ -1.42
LdlrP35951 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.2□□□□□ -1.42
LdlrP35951 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.2□□□□□ -1.42
LdlrP35951 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.2□□□□□ -1.42
LdlrP35951 Gm5324-201ENSMUST00000208115 476 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.2□□□□□ -1.42
LdlrP35951 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.2□□□□□ -1.42
LdlrP35951 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.2□□□□□ -1.42
LdlrP35951 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.2□□□□□ -1.42
LdlrP35951 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.2□□□□□ -1.42
LdlrP35951 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.2□□□□□ -1.42
LdlrP35951 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.2□□□□□ -1.42
LdlrP35951 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms