Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm9114-201ENSMUST00000188558 997 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm28066-201ENSMUST00000188657 472 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Ighv1-38-201ENSMUST00000192755 349 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm2229-201ENSMUST00000193328 710 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm43148-201ENSMUST00000198237 520 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm42938-201ENSMUST00000198414 1072 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm31579-201ENSMUST00000203306 966 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm9367-201ENSMUST00000205703 546 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm33178-201ENSMUST00000212090 257 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.65□□□□□ -1.67
Sdc1P18828 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC4.65□□□□□ -1.67
Sdc1P18828 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 AC152940.1-201ENSMUST00000226504 139 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 AC115304.1-202ENSMUST00000226850 837 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sdc1P18828 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.65□□□□□ -1.67
Sdc1P18828 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Sdc1P18828 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sdc1P18828 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Sdc1P18828 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm8822-201ENSMUST00000118948 2347 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm25595-201ENSMUST00000102273 97 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sdc1P18828 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm13899-201ENSMUST00000121519 1255 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.64□□□□□ -1.67
Sdc1P18828 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC4.64□□□□□ -1.67
Sdc1P18828 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm24647-201ENSMUST00000157112 113 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm22916-201ENSMUST00000157616 119 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm3140-201ENSMUST00000163523 481 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm22420-201ENSMUST00000178795 126 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Sdc1P18828 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm27781-201ENSMUST00000185185 92 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC4.64□□□□□ -1.67
Sdc1P18828 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm37030-201ENSMUST00000194254 295 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm37659-201ENSMUST00000194574 111 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm43382-201ENSMUST00000198954 838 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm7181-201ENSMUST00000202197 434 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm31663-202ENSMUST00000208481 1190 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.64□□□□□ -1.67
Sdc1P18828 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC4.64□□□□□ -1.67
Sdc1P18828 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC4.64□□□□□ -1.67
Sdc1P18828 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sdc1P18828 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sdc1P18828 Gm5446-201ENSMUST00000091762 784 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms