Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm22132-201ENSMUST00000175316 100 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Gm27543-201ENSMUST00000183562 177 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Gm36378-201ENSMUST00000201709 388 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Gm2961-201ENSMUST00000211074 772 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.78□□□□□ -1.32
Col1a1P11087 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col1a1P11087 Mir27a-201ENSMUST00000083510 87 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col1a1P11087 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col1a1P11087 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col1a1P11087 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col1a1P11087 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col1a1P11087 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.77□□□□□ -1.32
Col1a1P11087 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Col1a1P11087 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Col1a1P11087 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col1a1P11087 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Col1a1P11087 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Gm11826-201ENSMUST00000118781 438 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.77□□□□□ -1.33
Col1a1P11087 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Gm10319-202ENSMUST00000159439 846 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm22650-201ENSMUST00000175138 105 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm5946-201ENSMUST00000182340 970 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.77□□□□□ -1.33
Col1a1P11087 Gm18427-201ENSMUST00000195422 515 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm33952-201ENSMUST00000197795 408 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm44604-201ENSMUST00000205475 496 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm44539-201ENSMUST00000206010 238 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm5735-201ENSMUST00000207053 167 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm17766-201ENSMUST00000209223 442 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC6.77□□□□□ -1.33
Col1a1P11087 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Mir449a-201ENSMUST00000083641 91 ntBASIC6.77□□□□□ -1.33
Col1a1P11087 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col1a1P11087 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col1a1P11087 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col1a1P11087 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col1a1P11087 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col1a1P11087 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col1a1P11087 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col1a1P11087 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.76□□□□□ -1.33
Col1a1P11087 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Col1a1P11087 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Col1a1P11087 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col1a1P11087 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col1a1P11087 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col1a1P11087 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.76□□□□□ -1.33
Col1a1P11087 Gm26167-201ENSMUST00000158423 253 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Gm7609-204ENSMUST00000161424 461 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Gm23945-201ENSMUST00000179609 92 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Gm23011-202ENSMUST00000197855 275 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Gm18215-201ENSMUST00000204429 798 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col1a1P11087 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col1a1P11087 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col1a1P11087 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col1a1P11087 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.76□□□□□ -1.33
Col1a1P11087 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col1a1P11087 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.75□□□□□ -1.33
Col1a1P11087 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col1a1P11087 Gm22272-201ENSMUST00000104039 134 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Gm11550-201ENSMUST00000118210 699 ntBASIC6.75□□□□□ -1.33
Col1a1P11087 Gm6175-201ENSMUST00000121351 400 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms