Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Gm38697-201ENSMUST00000198061 1746 ntBASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Gm27193-201ENSMUST00000184217 586 ntBASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Gm20368-201ENSMUST00000220716 301 ntBASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 AC192088.3-201ENSMUST00000227858 831 ntBASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ccdc180J3QNE4 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm45172-201ENSMUST00000206054 1301 ntBASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Mir3062-201ENSMUST00000174986 105 ntBASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm44456-201ENSMUST00000196554 89 ntBASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm29755-201ENSMUST00000196976 948 ntBASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm43467-201ENSMUST00000197441 437 ntBASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Ankrd55-205ENSMUST00000223871 3209 ntBASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm20287-201ENSMUST00000172848 2367 ntBASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC10.56□□□□□ -0.72
Ccdc180J3QNE4 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Ap5m1-208ENSMUST00000228238 3514 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm42436-201ENSMUST00000198804 3656 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Mir193b-201ENSMUST00000103784 79 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm14998-201ENSMUST00000120502 495 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm24940-201ENSMUST00000158326 108 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm15838-201ENSMUST00000161575 180 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm44330-201ENSMUST00000200106 143 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm19169-201ENSMUST00000220109 1246 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 AC152394.2-202ENSMUST00000228503 1064 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm37685-201ENSMUST00000193507 2177 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Fam35a-206ENSMUST00000228626 3100 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Gm42503-201ENSMUST00000199080 3706 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 AC154576.1-202ENSMUST00000223966 3320 ntBASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Ccdc180J3QNE4 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm6125-201ENSMUST00000217983 3472 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm7079-201ENSMUST00000119726 171 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Mir6417-201ENSMUST00000183815 116 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm37215-201ENSMUST00000194927 1259 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm2053-201ENSMUST00000195671 631 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm17775-201ENSMUST00000198542 258 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Clec2j-202ENSMUST00000203658 606 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm2011-203ENSMUST00000203750 435 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm18468-201ENSMUST00000207321 369 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm18470-201ENSMUST00000207467 420 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm18465-201ENSMUST00000207468 369 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm18464-201ENSMUST00000207803 420 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm18458-201ENSMUST00000207908 369 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm18461-201ENSMUST00000208421 420 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 AC134537.2-201ENSMUST00000217770 575 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 AC165347.1-201ENSMUST00000224089 1025 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm25187-201ENSMUST00000083906 133 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 AC124581.3-201ENSMUST00000224270 1624 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 AC116950.1-201ENSMUST00000226322 3250 ntBASIC10.54□□□□□ -0.72
Ccdc180J3QNE4 Gm13681-201ENSMUST00000117925 210 ntBASIC10.53□□□□□ -0.72
Ccdc180J3QNE4 Gm12303-201ENSMUST00000119506 673 ntBASIC10.53□□□□□ -0.72
Ccdc180J3QNE4 Gm13007-201ENSMUST00000121866 365 ntBASIC10.53□□□□□ -0.72
Ccdc180J3QNE4 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc180J3QNE4 Ighv3-2-201ENSMUST00000191842 349 ntBASIC10.53□□□□□ -0.72
Ccdc180J3QNE4 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC10.53□□□□□ -0.72
Ccdc180J3QNE4 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms