Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm25418-201ENSMUST00000104214 129 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm25376-201ENSMUST00000104340 133 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm37167-201ENSMUST00000194946 396 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm43370-201ENSMUST00000196437 284 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm42566-201ENSMUST00000197120 643 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm43418-201ENSMUST00000201334 428 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm44871-201ENSMUST00000207821 497 ntBASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col6a3E9PWQ3 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm12732-201ENSMUST00000121688 180 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm3816-201ENSMUST00000209803 433 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm23511-201ENSMUST00000083084 164 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm24767-201ENSMUST00000158509 95 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm3077-201ENSMUST00000165903 627 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a3E9PWQ3 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm25726-201ENSMUST00000104529 129 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm21461-201ENSMUST00000200382 863 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 AC135119.1-202ENSMUST00000228435 2203 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm24350-201ENSMUST00000104163 133 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm11914-201ENSMUST00000117094 507 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm16276-201ENSMUST00000131218 262 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm20480-201ENSMUST00000173953 250 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm2367-201ENSMUST00000192374 472 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm18547-201ENSMUST00000192439 811 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Mecom-201ENSMUST00000061088 348 ntBASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a3E9PWQ3 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms