Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm27804-201ENSMUST00000185135 119 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm18350-201ENSMUST00000187395 955 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm18698-201ENSMUST00000192327 668 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm37758-201ENSMUST00000194275 629 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm37358-201ENSMUST00000195492 479 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.31□□□□□ -1.56
CtcflA2APF3 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CtcflA2APF3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CtcflA2APF3 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm6436-201ENSMUST00000077163 451 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Olfr687-201ENSMUST00000098154 938 ntBASIC5.31□□□□□ -1.56
CtcflA2APF3 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CtcflA2APF3 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CtcflA2APF3 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CtcflA2APF3 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CtcflA2APF3 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CtcflA2APF3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CtcflA2APF3 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Pramel-201ENSMUST00000118979 1383 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm14756-201ENSMUST00000116395 240 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm8424-201ENSMUST00000117716 988 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm11445-201ENSMUST00000119101 532 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm14831-201ENSMUST00000120253 409 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm23968-201ENSMUST00000175047 125 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm2367-201ENSMUST00000192374 472 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm42708-201ENSMUST00000196332 905 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.3□□□□□ -1.56
CtcflA2APF3 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.3□□□□□ -1.56
CtcflA2APF3 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CtcflA2APF3 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CtcflA2APF3 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CtcflA2APF3 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.29□□□□□ -1.56
CtcflA2APF3 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.29□□□□□ -1.56
CtcflA2APF3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CtcflA2APF3 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CtcflA2APF3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
CtcflA2APF3 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.29□□□□□ -1.56
CtcflA2APF3 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.29□□□□□ -1.56
CtcflA2APF3 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms