Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm23440-201ENSMUST00000104299 130 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm13811-201ENSMUST00000117800 256 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm13593-201ENSMUST00000121329 692 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm17046-201ENSMUST00000168078 850 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm22655-201ENSMUST00000174949 96 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm29489-201ENSMUST00000188934 324 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm29592-201ENSMUST00000189434 370 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm5734-201ENSMUST00000189787 913 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm7832-201ENSMUST00000202613 880 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm19033-201ENSMUST00000208516 964 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm19196-201ENSMUST00000209258 357 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm7499-201ENSMUST00000210423 813 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm4032-201ENSMUST00000210886 487 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm15781-201ENSMUST00000120216 323 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm13998-201ENSMUST00000120952 335 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm11761-201ENSMUST00000121392 445 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm25013-201ENSMUST00000158402 128 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm24081-201ENSMUST00000175177 125 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Mir6361-201ENSMUST00000185079 101 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm2979-201ENSMUST00000193442 463 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm6631-201ENSMUST00000193699 559 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm37774-201ENSMUST00000194401 245 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm35013-201ENSMUST00000197218 832 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm43743-202ENSMUST00000198353 491 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm44251-201ENSMUST00000204963 442 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm5318-201ENSMUST00000205249 406 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm45724-201ENSMUST00000213031 420 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm18405-201ENSMUST00000220743 511 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm26226-201ENSMUST00000082509 116 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim3Q9R1R2 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Trim3Q9R1R2 Gm25917-201ENSMUST00000104267 130 ntBASIC5.53□□□□□ -1.52
Trim3Q9R1R2 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms