Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm23686-201ENSMUST00000083241 164 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Mir7b-201ENSMUST00000083557 111 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.46□□□□□ -1.53
Use1Q9CQ56 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.46□□□□□ -1.53
Use1Q9CQ56 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Use1Q9CQ56 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.46□□□□□ -1.53
Use1Q9CQ56 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.46□□□□□ -1.53
Use1Q9CQ56 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm11271-201ENSMUST00000116054 440 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm15400-201ENSMUST00000118944 601 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm12322-201ENSMUST00000121605 389 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm14970-201ENSMUST00000122289 355 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm22650-201ENSMUST00000175138 105 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm19124-201ENSMUST00000191041 832 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm44494-201ENSMUST00000196760 129 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm10688-201ENSMUST00000214985 520 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm19186-201ENSMUST00000219922 333 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Use1Q9CQ56 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.46□□□□□ -1.54
Use1Q9CQ56 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm2199-201ENSMUST00000119065 874 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm14115-201ENSMUST00000119242 482 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm16016-201ENSMUST00000120831 550 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm13440-201ENSMUST00000121665 496 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm12293-201ENSMUST00000121898 590 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm23069-201ENSMUST00000158240 311 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm22361-201ENSMUST00000158435 176 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm24363-201ENSMUST00000158440 311 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm25025-201ENSMUST00000175018 111 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm17048-201ENSMUST00000179266 847 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm27037-201ENSMUST00000182270 960 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Mir6992-201ENSMUST00000183342 109 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm37375-201ENSMUST00000193859 387 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm37385-201ENSMUST00000195223 387 ntBASIC5.45□□□□□ -1.54
Use1Q9CQ56 Gm43084-201ENSMUST00000200696 947 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms