Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm7780-201ENSMUST00000214787 406 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 AC122305.2-201ENSMUST00000215148 834 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm18705-201ENSMUST00000215985 913 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm18940-201ENSMUST00000222518 871 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.2□□□□□ -1.58
Scrt1Q99M85 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Mir449c-201ENSMUST00000102192 109 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Mir193b-201ENSMUST00000103784 79 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm13811-201ENSMUST00000117800 256 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm6744-201ENSMUST00000119303 543 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm13333-201ENSMUST00000119424 781 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm12813-201ENSMUST00000119615 902 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm12936-201ENSMUST00000121439 301 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm11894-201ENSMUST00000121579 328 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm23669-201ENSMUST00000157470 128 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm25489-201ENSMUST00000158727 141 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm9671-201ENSMUST00000171502 547 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm37681-201ENSMUST00000193880 727 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm8920-201ENSMUST00000196153 924 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm43148-201ENSMUST00000198237 520 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm43743-202ENSMUST00000198353 491 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm6474-201ENSMUST00000223250 699 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm24041-201ENSMUST00000083115 156 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scrt1Q99M85 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.19□□□□□ -1.58
Scrt1Q99M85 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.18□□□□□ -1.58
Scrt1Q99M85 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Scrt1Q99M85 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms