Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm24319-201ENSMUST00000083389 107 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Clp1Q99LI9 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Clp1Q99LI9 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Clp1Q99LI9 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm22019-201ENSMUST00000104359 96 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm11799-201ENSMUST00000116110 460 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm22072-201ENSMUST00000116850 121 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm15001-201ENSMUST00000117657 795 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm13983-201ENSMUST00000118018 865 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm11902-201ENSMUST00000118849 270 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm11260-201ENSMUST00000121163 942 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Snrpert-201ENSMUST00000121967 279 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm25178-201ENSMUST00000122633 325 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm5456-201ENSMUST00000170706 844 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm17045-201ENSMUST00000178600 844 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm26509-201ENSMUST00000180947 948 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm9167-201ENSMUST00000182469 962 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Mir8118-201ENSMUST00000183962 129 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm8676-201ENSMUST00000184206 637 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm27653-201ENSMUST00000185037 136 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm3933-201ENSMUST00000195391 439 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm9236-201ENSMUST00000196892 587 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm5853-201ENSMUST00000197183 632 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm42958-201ENSMUST00000197595 318 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm44075-201ENSMUST00000204208 216 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm46203-201ENSMUST00000218130 478 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 AC174776.1-201ENSMUST00000221509 405 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 AC174776.2-201ENSMUST00000222561 405 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm5374-202ENSMUST00000222910 314 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 AC144628.1-201ENSMUST00000227943 466 ntBASIC7.33□□□□□ -1.24
Clp1Q99LI9 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.33□□□□□ -1.24
Clp1Q99LI9 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Clp1Q99LI9 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms