Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp11Q99K46 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm10410-201ENSMUST00000180138 384 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm26898-201ENSMUST00000181678 384 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm29588-201ENSMUST00000185738 298 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm29385-201ENSMUST00000186831 363 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm18183-201ENSMUST00000191024 615 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm37857-201ENSMUST00000191784 1199 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm37430-201ENSMUST00000193039 196 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm43392-201ENSMUST00000196560 434 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm35013-201ENSMUST00000197218 832 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm19039-201ENSMUST00000204363 575 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm45078-201ENSMUST00000205343 546 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm19033-201ENSMUST00000208516 964 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm45724-201ENSMUST00000213031 420 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp11Q99K46 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.16□□□□□ -1.42
Usp11Q99K46 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Usp11Q99K46 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.16□□□□□ -1.42
Usp11Q99K46 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.16□□□□□ -1.42
Usp11Q99K46 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm13772-201ENSMUST00000118431 317 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm15237-201ENSMUST00000122104 469 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm23430-201ENSMUST00000122490 314 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm24179-201ENSMUST00000158925 127 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm4845-201ENSMUST00000179202 562 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm27602-201ENSMUST00000183861 111 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm28934-201ENSMUST00000186491 346 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm5066-201ENSMUST00000188479 822 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm6631-201ENSMUST00000193699 559 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm31211-201ENSMUST00000199170 253 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm44849-201ENSMUST00000207595 484 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm18467-201ENSMUST00000208805 434 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Gm3213-201ENSMUST00000219296 441 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Cma2-202ENSMUST00000228263 857 ntBASIC6.15□□□□□ -1.42
Usp11Q99K46 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Usp11Q99K46 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms