Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mir7669-201ENSMUST00000183442 58 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm28859-201ENSMUST00000186650 616 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm21617-201ENSMUST00000188297 691 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm44138-201ENSMUST00000204939 271 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm6230-201ENSMUST00000208077 780 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm17820-201ENSMUST00000220213 1068 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm7557-201ENSMUST00000221935 865 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm23238-201ENSMUST00000083007 164 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm10205-201ENSMUST00000087431 234 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm22444-201ENSMUST00000093693 108 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm22267-201ENSMUST00000104008 131 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm24590-201ENSMUST00000116699 119 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm4596-201ENSMUST00000117197 442 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm15110-201ENSMUST00000117545 881 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm11212-201ENSMUST00000118337 618 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm11920-201ENSMUST00000118491 563 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm12375-201ENSMUST00000119331 921 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm5793-201ENSMUST00000119393 630 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm5387-201ENSMUST00000119776 857 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm15019-201ENSMUST00000120148 434 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm13024-201ENSMUST00000121756 718 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm14800-201ENSMUST00000122084 1272 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm15077-201ENSMUST00000122344 362 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm26037-201ENSMUST00000158150 311 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm28648-201ENSMUST00000190092 343 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm37996-201ENSMUST00000191859 367 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm37098-201ENSMUST00000192290 244 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm42652-201ENSMUST00000199073 614 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm44221-201ENSMUST00000203552 388 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm44279-201ENSMUST00000205154 472 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm30646-201ENSMUST00000207662 180 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.04□□□□□ -1.44
Clrn1Q8K445 Gm46364-201ENSMUST00000218548 319 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 AC155305.1-201ENSMUST00000222207 319 ntBASIC6.04□□□□□ -1.44
Clrn1Q8K445 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms