Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Brf1Q8CFK2 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Gm45493-201ENSMUST00000209494 3948 ntBASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Brf1Q8CFK2 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Brf1Q8CFK2 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC120375.1-201ENSMUST00000227034 3612 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Mir700-201ENSMUST00000102169 79 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm25917-201ENSMUST00000104267 130 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm14529-201ENSMUST00000117894 406 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm9597-201ENSMUST00000171913 602 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Vis1-201ENSMUST00000183957 201 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Mir6361-201ENSMUST00000185079 101 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm29124-201ENSMUST00000186576 452 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm44316-201ENSMUST00000199274 97 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm19201-201ENSMUST00000210127 778 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC122393.2-201ENSMUST00000226404 1093 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC116724.1-201ENSMUST00000227900 972 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 AC123658.1-201ENSMUST00000228364 867 ntBASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Brf1Q8CFK2 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Brf1Q8CFK2 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.15□□□□□ -1.27
Brf1Q8CFK2 Gm6125-201ENSMUST00000217983 3472 ntBASIC7.15□□□□□ -1.27
Brf1Q8CFK2 Gm43162-201ENSMUST00000198292 1770 ntBASIC7.15□□□□□ -1.27
Brf1Q8CFK2 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.15□□□□□ -1.27
Brf1Q8CFK2 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm4910-201ENSMUST00000119605 366 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm16016-201ENSMUST00000120831 550 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm15970-201ENSMUST00000160623 834 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm22655-201ENSMUST00000174949 96 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm28996-201ENSMUST00000190316 721 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm37751-201ENSMUST00000192440 1198 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm38283-201ENSMUST00000193041 695 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm18747-201ENSMUST00000198129 648 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm2287-202ENSMUST00000199619 1000 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm30708-201ENSMUST00000202183 312 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 Gm44219-201ENSMUST00000203005 273 ntBASIC7.14□□□□□ -1.27
Brf1Q8CFK2 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms