Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm11561-201ENSMUST00000117429 417 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm15981-201ENSMUST00000119196 457 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm13333-201ENSMUST00000119424 781 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12583-201ENSMUST00000120677 853 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12535-201ENSMUST00000121025 484 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm24422-201ENSMUST00000157800 119 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm26970-201ENSMUST00000182990 964 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm21803-201ENSMUST00000188897 693 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm29496-201ENSMUST00000189854 693 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm28567-201ENSMUST00000190270 693 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37044-201ENSMUST00000193531 693 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37030-201ENSMUST00000194254 295 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm38369-201ENSMUST00000195101 693 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm18482-201ENSMUST00000202405 760 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm23054-201ENSMUST00000082804 162 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.72□□□□□ -1.49
Ccdc28bQ8CEG5 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.71□□□□□ -1.49
Ccdc28bQ8CEG5 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc28bQ8CEG5 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc28bQ8CEG5 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm25595-201ENSMUST00000102273 97 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm25916-201ENSMUST00000104263 131 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm11270-201ENSMUST00000117685 471 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm13363-201ENSMUST00000122008 522 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm26162-201ENSMUST00000157793 132 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm26238-201ENSMUST00000175538 117 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm18700-201ENSMUST00000185791 553 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm28114-201ENSMUST00000187232 379 ntBASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28bQ8CEG5 Gm37784-201ENSMUST00000193233 189 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms