Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm11105-201ENSMUST00000112781 478 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm7927-201ENSMUST00000118818 880 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm15786-201ENSMUST00000121079 450 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm21772-201ENSMUST00000169213 478 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm17126-201ENSMUST00000172276 523 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm44382-201ENSMUST00000198683 122 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm18689-201ENSMUST00000203969 902 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm45750-201ENSMUST00000211966 354 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm23686-201ENSMUST00000083241 164 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Nup88Q8CEC0 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.86□□□□□ -1.31
Nup88Q8CEC0 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm16007-201ENSMUST00000117837 286 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm13991-201ENSMUST00000120190 648 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm8988-201ENSMUST00000155015 1240 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm24741-201ENSMUST00000158857 106 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm16139-201ENSMUST00000160015 420 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm20480-201ENSMUST00000173953 250 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Mirt2-201ENSMUST00000175179 285 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm18407-201ENSMUST00000192126 790 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm43215-201ENSMUST00000199108 252 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm8412-201ENSMUST00000077493 440 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Nup88Q8CEC0 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.84□□□□□ -1.31
Nup88Q8CEC0 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.84□□□□□ -1.31
Nup88Q8CEC0 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.84□□□□□ -1.31
Nup88Q8CEC0 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm23662-201ENSMUST00000158046 111 ntBASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Mir5125-201ENSMUST00000175240 79 ntBASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Mir3572-201ENSMUST00000175549 86 ntBASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.84□□□□□ -1.31
Nup88Q8CEC0 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms