Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Vps53Q8CCB4 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.02□□□□□ -1.28
Vps53Q8CCB4 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.02□□□□□ -1.28
Vps53Q8CCB4 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.02□□□□□ -1.28
Vps53Q8CCB4 Gm20789-201ENSMUST00000221002 4195 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm7931-201ENSMUST00000121537 271 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm14840-201ENSMUST00000122135 594 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm22599-201ENSMUST00000157597 132 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm37758-201ENSMUST00000194275 629 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm37720-201ENSMUST00000195497 1241 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm43105-201ENSMUST00000202987 459 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm6590-201ENSMUST00000203343 687 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm21089-201ENSMUST00000215843 325 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm18409-202ENSMUST00000220105 529 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm18592-201ENSMUST00000221529 276 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm42607-201ENSMUST00000200221 3393 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm38105-201ENSMUST00000192112 2621 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Vps53Q8CCB4 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 BC055308-201ENSMUST00000193380 2538 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm43386-201ENSMUST00000199654 4001 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm45633-201ENSMUST00000210669 3253 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm7146-201ENSMUST00000116079 739 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm8424-201ENSMUST00000117716 988 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm15332-201ENSMUST00000118386 357 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm11852-201ENSMUST00000120806 222 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm15786-201ENSMUST00000121079 450 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm8061-201ENSMUST00000122380 350 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 n-R5s30-201ENSMUST00000122624 122 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm26167-201ENSMUST00000158423 253 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm5277-201ENSMUST00000164923 556 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm38181-201ENSMUST00000181357 720 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm8641-201ENSMUST00000186995 826 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm28080-201ENSMUST00000188552 722 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm38131-201ENSMUST00000192449 430 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm6631-201ENSMUST00000193699 559 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm37838-201ENSMUST00000194464 312 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.01□□□□□ -1.29
Vps53Q8CCB4 Gm19039-201ENSMUST00000204363 575 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms