Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm37206-201ENSMUST00000195512 3069 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm20674-201ENSMUST00000177452 369 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm37631-201ENSMUST00000192275 364 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm5457-201ENSMUST00000022260 333 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm5087-204ENSMUST00000225820 645 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm8999-201ENSMUST00000204951 969 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm44259-201ENSMUST00000204996 298 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm45032-201ENSMUST00000205375 520 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm10709-201ENSMUST00000213318 480 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Gm23511-201ENSMUST00000083084 164 ntBASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a6Q8C6K9 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm20706-201ENSMUST00000175985 2023 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm11366-201ENSMUST00000119279 429 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm12115-201ENSMUST00000119969 447 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm15480-201ENSMUST00000120442 519 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm24767-201ENSMUST00000158509 95 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm28061-201ENSMUST00000189085 807 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm18702-201ENSMUST00000196923 588 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm43467-201ENSMUST00000197441 437 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm35648-201ENSMUST00000202304 475 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm6427-201ENSMUST00000118721 979 ntBASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a6Q8C6K9 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms