Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 AC159263.3-201ENSMUST00000223434 460 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 AC131745.1-201ENSMUST00000223660 330 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm5528-201ENSMUST00000076314 480 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Snora21-201ENSMUST00000082967 137 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm44242-201ENSMUST00000204212 2721 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Mir697-201ENSMUST00000102316 109 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm12102-201ENSMUST00000118251 604 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm12174-201ENSMUST00000119853 813 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm14531-201ENSMUST00000120845 285 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm15316-201ENSMUST00000121082 421 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm14638-201ENSMUST00000121338 216 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm15388-201ENSMUST00000121578 726 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm8121-201ENSMUST00000153583 499 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm24680-201ENSMUST00000158759 126 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm6808-201ENSMUST00000162341 807 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm9613-201ENSMUST00000171662 196 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm27178-201ENSMUST00000184962 340 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm17777-201ENSMUST00000189740 1276 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm43559-201ENSMUST00000198755 466 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm2314-201ENSMUST00000200391 586 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm3549-201ENSMUST00000203873 794 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm17918-201ENSMUST00000205315 574 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm44972-201ENSMUST00000206419 406 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm8911-201ENSMUST00000213986 652 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm18729-201ENSMUST00000217230 621 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm23097-201ENSMUST00000083448 105 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim47Q8C0E3 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms