Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm28640-201ENSMUST00000190918 550 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm37934-201ENSMUST00000192902 402 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm19095-201ENSMUST00000220533 730 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 AC123062.1-201ENSMUST00000221287 481 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm37686-201ENSMUST00000194099 2309 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm4973-201ENSMUST00000206925 1334 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm19125-201ENSMUST00000188408 1383 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm45263-201ENSMUST00000210377 1375 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm8424-201ENSMUST00000117716 988 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm14335-201ENSMUST00000119165 810 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm22492-201ENSMUST00000157192 297 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm3605-201ENSMUST00000185858 440 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm8929-201ENSMUST00000197781 1132 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm43054-201ENSMUST00000199495 884 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 AC069561.2-201ENSMUST00000217596 420 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm9269-201ENSMUST00000221661 578 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 AC164618.3-201ENSMUST00000224863 681 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 n-R5s204-201ENSMUST00000082972 119 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 n-R5s36-201ENSMUST00000082998 119 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm9930-201ENSMUST00000066742 3151 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.25□□□□□ -1.09
Usp40Q8BWR4 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Usp40Q8BWR4 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm15933-201ENSMUST00000117215 616 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm16423-201ENSMUST00000120078 947 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm25152-201ENSMUST00000157117 114 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm26372-201ENSMUST00000157831 236 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm28066-201ENSMUST00000188657 472 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm20770-201ENSMUST00000193474 694 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Mir219c-201ENSMUST00000199860 60 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm43136-201ENSMUST00000200403 636 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm43456-201ENSMUST00000202519 457 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm44137-201ENSMUST00000203670 367 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm45240-201ENSMUST00000211437 674 ntBASIC8.24□□□□□ -1.09
Usp40Q8BWR4 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp40Q8BWR4 Gm6056-201ENSMUST00000221253 488 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms