Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm42998-201ENSMUST00000197053 2371 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trim41Q5NCC3 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm26575-201ENSMUST00000181714 2232 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm42820-201ENSMUST00000200084 3063 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm12573-201ENSMUST00000118158 286 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm11708-201ENSMUST00000119530 832 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm13743-201ENSMUST00000121486 724 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm7316-201ENSMUST00000165395 445 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm6717-201ENSMUST00000185549 838 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm20954-201ENSMUST00000189078 644 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm38050-201ENSMUST00000191904 238 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm43215-201ENSMUST00000199108 252 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm5055-201ENSMUST00000215697 581 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 AC127279.1-201ENSMUST00000220140 637 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Mir138-1-201ENSMUST00000083480 99 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Gm25512-201ENSMUST00000083863 107 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 AC107763.1-202ENSMUST00000225021 2663 ntBASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim41Q5NCC3 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm25785-201ENSMUST00000104129 125 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm15108-201ENSMUST00000116160 803 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm14919-201ENSMUST00000120839 390 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm12332-201ENSMUST00000121397 922 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm12540-201ENSMUST00000121938 319 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm15300-201ENSMUST00000122324 279 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm23030-201ENSMUST00000158004 273 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm4373-201ENSMUST00000178571 556 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm27460-201ENSMUST00000184213 100 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm28418-201ENSMUST00000186179 423 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm20932-201ENSMUST00000189115 694 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm18900-201ENSMUST00000193218 584 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm44409-201ENSMUST00000198810 166 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm45279-201ENSMUST00000210315 391 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 AC153557.1-201ENSMUST00000217697 403 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 AC124356.2-201ENSMUST00000221874 336 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 AC124395.1-201ENSMUST00000225940 707 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm9874-202ENSMUST00000194957 1464 ntBASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim41Q5NCC3 Gm37924-201ENSMUST00000195470 3647 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Zfp640-202ENSMUST00000224116 1562 ntBASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim41Q5NCC3 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms