Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm22953-201ENSMUST00000116724 101 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm22311-201ENSMUST00000158006 110 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm44091-201ENSMUST00000205212 649 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm18591-201ENSMUST00000220568 763 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm7042-201ENSMUST00000223027 384 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm25133-201ENSMUST00000082647 130 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.19□□□□□ -1.42
Upf3bQ3ULL6 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm22372-201ENSMUST00000104589 136 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm13593-201ENSMUST00000121329 692 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm4660-201ENSMUST00000131499 403 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm23279-201ENSMUST00000157912 97 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm23408-201ENSMUST00000158523 265 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm22650-201ENSMUST00000175138 105 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm27006-201ENSMUST00000182218 943 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm44432-201ENSMUST00000203342 938 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Upf3bQ3ULL6 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm22499-201ENSMUST00000104501 135 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm14938-201ENSMUST00000119482 943 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm9006-201ENSMUST00000165520 841 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm6472-201ENSMUST00000178147 651 ntBASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.17□□□□□ -1.42
Upf3bQ3ULL6 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms