Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm25179-201ENSMUST00000122632 128 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm25557-201ENSMUST00000158084 315 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm16563-201ENSMUST00000162673 423 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm8183-201ENSMUST00000183134 980 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm27186-201ENSMUST00000184223 307 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm28023-201ENSMUST00000184556 60 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm27825-201ENSMUST00000184586 60 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm18447-201ENSMUST00000187501 307 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm6074-201ENSMUST00000193340 451 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm43245-201ENSMUST00000197603 468 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm44538-201ENSMUST00000205615 348 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm2926-201ENSMUST00000205625 239 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm38574-201ENSMUST00000211855 640 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm7119-201ENSMUST00000221345 695 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 AC154636.3-201ENSMUST00000221489 1214 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Diaph3-206ENSMUST00000226745 713 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Usp39Q3TIX9 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.11□□□□□ -1.43
Usp39Q3TIX9 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Rnu11-201ENSMUST00000104135 134 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm25507-201ENSMUST00000116981 144 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm14733-201ENSMUST00000117680 133 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm13338-201ENSMUST00000120235 361 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm9435-201ENSMUST00000120379 877 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm12833-201ENSMUST00000136112 477 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm29474-201ENSMUST00000187688 379 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm28396-201ENSMUST00000190309 379 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm37433-201ENSMUST00000192695 678 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm38237-201ENSMUST00000193366 376 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm37441-201ENSMUST00000194430 678 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm9504-201ENSMUST00000196322 468 ntBASIC6.1□□□□□ -1.43
Usp39Q3TIX9 Gm43005-201ENSMUST00000199015 648 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms