Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm21036-201ENSMUST00000207544 2611 ntBASIC9.1□□□□□ -0.95
Col17a1Q07563 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Gm5133-201ENSMUST00000118940 1255 ntBASIC9.1□□□□□ -0.95
Col17a1Q07563 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Mir8097-201ENSMUST00000185150 119 ntBASIC9.1□□□□□ -0.95
Col17a1Q07563 Gm43316-201ENSMUST00000197252 1295 ntBASIC9.1□□□□□ -0.95
Col17a1Q07563 Gm44776-201ENSMUST00000207212 381 ntBASIC9.1□□□□□ -0.95
Col17a1Q07563 Gm45072-201ENSMUST00000208673 929 ntBASIC9.1□□□□□ -0.95
Col17a1Q07563 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Gm8980-201ENSMUST00000140232 2197 ntBASIC9.1□□□□□ -0.95
Col17a1Q07563 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col17a1Q07563 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Col17a1Q07563 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm14656-201ENSMUST00000120342 502 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm27551-201ENSMUST00000184258 77 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm28973-201ENSMUST00000189310 613 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm29332-201ENSMUST00000190829 227 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm17790-201ENSMUST00000191545 1228 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm8523-201ENSMUST00000211386 552 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm8412-201ENSMUST00000077493 440 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 AC131747.2-201ENSMUST00000226121 1895 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm44185-201ENSMUST00000204539 3307 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 AC120347.2-201ENSMUST00000222224 2015 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm44661-201ENSMUST00000208830 3503 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 AC105407.2-205ENSMUST00000224680 2733 ntBASIC9.09□□□□□ -0.95
Col17a1Q07563 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col17a1Q07563 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC9.09□□□□□ -0.95
Col17a1Q07563 AL450321.1-201ENSMUST00000220600 3550 ntBASIC9.09□□□□□ -0.96
Col17a1Q07563 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm12427-201ENSMUST00000117719 302 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm11975-201ENSMUST00000118772 481 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm22132-201ENSMUST00000175316 100 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm37751-201ENSMUST00000192440 1198 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm9710-201ENSMUST00000198053 499 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm6051-201ENSMUST00000201529 352 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm19168-201ENSMUST00000218804 1091 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Col17a1Q07563 AC168881.1-201ENSMUST00000226018 430 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm15425-201ENSMUST00000119013 2711 ntBASIC9.08□□□□□ -0.96
Col17a1Q07563 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col17a1Q07563 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col17a1Q07563 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms