Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sf3b6P59708 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sf3b6P59708 Gm36927-201ENSMUST00000192504 1841 ntBASIC6.11□□□□□ -1.43
Sf3b6P59708 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sf3b6P59708 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 n-R5s9-201ENSMUST00000104432 117 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm7129-201ENSMUST00000117402 997 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm11719-201ENSMUST00000119399 351 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm22478-201ENSMUST00000122570 154 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm25505-201ENSMUST00000157220 246 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm17973-201ENSMUST00000174509 520 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm4373-201ENSMUST00000178571 556 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm28006-201ENSMUST00000183841 122 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm20111-201ENSMUST00000184830 319 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm27538-201ENSMUST00000185065 294 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Igkv12-49-201ENSMUST00000197714 278 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm3103-201ENSMUST00000198073 752 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3b6P59708 AC164116.1-201ENSMUST00000225810 622 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 AC115735.3-201ENSMUST00000227757 513 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Olfr192-201ENSMUST00000080251 925 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm24921-201ENSMUST00000083024 107 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Sf3b6P59708 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3b6P59708 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Sf3b6P59708 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.09□□□□□ -1.43
Sf3b6P59708 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3b6P59708 Mir697-201ENSMUST00000102316 109 ntBASIC6.09□□□□□ -1.43
Sf3b6P59708 Gm22439-201ENSMUST00000104048 132 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms