Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm17934-201ENSMUST00000192818 422 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm5309-201ENSMUST00000197416 677 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm4602-201ENSMUST00000203198 308 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm43967-201ENSMUST00000203787 301 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm44239-201ENSMUST00000204228 271 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm19201-201ENSMUST00000210127 778 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Gm7570-201ENSMUST00000215246 698 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm9088-201ENSMUST00000220237 508 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Diaph3-206ENSMUST00000226745 713 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm24035-201ENSMUST00000082867 107 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Shmt1P50431 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Shmt1P50431 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.53□□□□□ -1.36
Shmt1P50431 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Shmt1P50431 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Shmt1P50431 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.52□□□□□ -1.37
Shmt1P50431 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Shmt1P50431 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Shmt1P50431 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Mir669l-201ENSMUST00000103771 98 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm13731-201ENSMUST00000117332 196 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm12115-201ENSMUST00000119969 447 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm26486-201ENSMUST00000158021 110 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm24733-201ENSMUST00000158863 253 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm16563-201ENSMUST00000162673 423 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm27845-201ENSMUST00000184479 114 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Mir6361-201ENSMUST00000185079 101 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm37337-201ENSMUST00000192601 993 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm43116-201ENSMUST00000199789 195 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm44360-201ENSMUST00000200081 82 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.52□□□□□ -1.37
Shmt1P50431 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.52□□□□□ -1.37
Shmt1P50431 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm5612-201ENSMUST00000053326 375 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Gm22126-201ENSMUST00000083244 142 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Shmt1P50431 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Shmt1P50431 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Shmt1P50431 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Shmt1P50431 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm42852-201ENSMUST00000202649 1379 ntBASIC6.52□□□□□ -1.37
Shmt1P50431 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Shmt1P50431 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Shmt1P50431 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.51□□□□□ -1.37
Shmt1P50431 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Shmt1P50431 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms