Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Cdx2P43241 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Cdx2P43241 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Cdx2P43241 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cdx2P43241 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdx2P43241 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm14512-201ENSMUST00000117924 230 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Gm13866-201ENSMUST00000118901 968 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx2P43241 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm24295-201ENSMUST00000158298 131 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Gm24940-201ENSMUST00000158326 108 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Mir3062-201ENSMUST00000174986 105 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Cdx2P43241 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm28507-201ENSMUST00000189737 703 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Gm8523-201ENSMUST00000211386 552 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdx2P43241 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx2P43241 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Gm3785-201ENSMUST00000221000 202 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.61□□□□□ -1.51
Cdx2P43241 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Cdx2P43241 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdx2P43241 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdx2P43241 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdx2P43241 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx2P43241 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Mir678-201ENSMUST00000102114 84 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm23750-201ENSMUST00000104222 132 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm4911-201ENSMUST00000119388 945 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Gm14679-201ENSMUST00000121536 722 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm25603-201ENSMUST00000158361 105 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdx2P43241 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx2P43241 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm29650-201ENSMUST00000188485 742 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Gm29376-201ENSMUST00000189357 835 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Gm43712-201ENSMUST00000198020 291 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Gm43554-201ENSMUST00000199987 186 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx2P43241 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx2P43241 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm10064-201ENSMUST00000071235 399 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.6□□□□□ -1.51
Cdx2P43241 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdx2P43241 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx2P43241 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms