Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.06□□□□□ -1.44
Cxcl12P40224 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.06□□□□□ -1.44
Cxcl12P40224 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.06□□□□□ -1.44
Cxcl12P40224 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cxcl12P40224 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cxcl12P40224 Gm25147-201ENSMUST00000083030 105 ntBASIC6.06□□□□□ -1.44
Cxcl12P40224 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.06□□□□□ -1.44
Cxcl12P40224 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cxcl12P40224 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cxcl12P40224 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cxcl12P40224 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cxcl12P40224 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.06□□□□□ -1.44
Cxcl12P40224 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cxcl12P40224 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cxcl12P40224 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cxcl12P40224 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.06□□□□□ -1.44
Cxcl12P40224 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cxcl12P40224 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.06□□□□□ -1.44
Cxcl12P40224 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.06□□□□□ -1.44
Cxcl12P40224 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Robo2-210ENSMUST00000226478 8059 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm13866-201ENSMUST00000118901 968 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm12444-201ENSMUST00000121512 877 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm13077-201ENSMUST00000121941 484 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Mir7669-201ENSMUST00000183442 58 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.05□□□□□ -1.44
Cxcl12P40224 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm43973-201ENSMUST00000203562 210 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm8523-201ENSMUST00000211386 552 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cxcl12P40224 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.05□□□□□ -1.44
Cxcl12P40224 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cxcl12P40224 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Cxcl12P40224 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm7309-201ENSMUST00000121670 581 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm25227-201ENSMUST00000158204 112 ntBASIC6.04□□□□□ -1.44
Cxcl12P40224 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cxcl12P40224 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cxcl12P40224 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms