Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.92□□□□□ -1.3
Traf1P39428 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC6.92□□□□□ -1.3
Traf1P39428 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.92□□□□□ -1.3
Traf1P39428 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Traf1P39428 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Traf1P39428 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Traf1P39428 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Traf1P39428 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Gm16423-201ENSMUST00000120078 947 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm12494-201ENSMUST00000121684 521 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm24395-201ENSMUST00000158139 125 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm24731-201ENSMUST00000158227 131 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm25445-201ENSMUST00000158996 299 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Gm4322-201ENSMUST00000191094 336 ntBASIC6.91□□□□□ -1.3
Traf1P39428 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm37235-201ENSMUST00000195171 59 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm29745-201ENSMUST00000198005 687 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm42983-201ENSMUST00000199879 815 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm5886-202ENSMUST00000203957 522 ntBASIC6.91□□□□□ -1.3
Traf1P39428 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.91□□□□□ -1.3
Traf1P39428 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.91□□□□□ -1.3
Traf1P39428 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm23624-201ENSMUST00000082463 321 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.91□□□□□ -1.3
Traf1P39428 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Traf1P39428 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Traf1P39428 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.9□□□□□ -1.3
Traf1P39428 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Traf1P39428 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Traf1P39428 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Traf1P39428 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Traf1P39428 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Traf1P39428 Gm5073-201ENSMUST00000118222 820 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm13440-201ENSMUST00000121665 496 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm12293-201ENSMUST00000121898 590 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.9□□□□□ -1.3
Traf1P39428 Gm6081-201ENSMUST00000134472 489 ntBASIC6.9□□□□□ -1.3
Traf1P39428 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.9□□□□□ -1.3
Traf1P39428 Gm20401-201ENSMUST00000173717 212 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm18199-201ENSMUST00000173820 835 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm21399-201ENSMUST00000180210 597 ntBASIC6.9□□□□□ -1.3
Traf1P39428 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Traf1P39428 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms