Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.56□□□□□ -1.36
Col2a1P28481 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col2a1P28481 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col2a1P28481 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Cmah-208ENSMUST00000224819 9482 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.55□□□□□ -1.36
Col2a1P28481 Mir92b-201ENSMUST00000102300 83 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm15428-201ENSMUST00000121352 333 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm4832-201ENSMUST00000182679 399 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm29376-201ENSMUST00000189357 835 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col2a1P28481 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.55□□□□□ -1.36
Col2a1P28481 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col2a1P28481 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col2a1P28481 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col2a1P28481 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col2a1P28481 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Col2a1P28481 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.55□□□□□ -1.36
Col2a1P28481 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.55□□□□□ -1.36
Col2a1P28481 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.55□□□□□ -1.36
Col2a1P28481 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.54□□□□□ -1.36
Col2a1P28481 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm12303-201ENSMUST00000119506 673 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm26489-201ENSMUST00000157880 264 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Gm24295-201ENSMUST00000158298 131 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Clec2j-202ENSMUST00000203658 606 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.54□□□□□ -1.36
Col2a1P28481 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Col2a1P28481 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm5321-201ENSMUST00000072050 447 ntBASIC6.54□□□□□ -1.36
Col2a1P28481 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col2a1P28481 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col2a1P28481 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.54□□□□□ -1.36
Col2a1P28481 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col2a1P28481 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col2a1P28481 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms