Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pde6aP27664 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pde6aP27664 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm28359-201ENSMUST00000187470 1322 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Pde6aP27664 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
Pde6aP27664 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Snord65-201ENSMUST00000104269 72 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm11902-201ENSMUST00000118849 270 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm13678-201ENSMUST00000118926 340 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm14554-201ENSMUST00000119548 661 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm12308-201ENSMUST00000120440 389 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm14212-201ENSMUST00000122023 826 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm25387-201ENSMUST00000157813 132 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm26000-201ENSMUST00000157991 107 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm26487-201ENSMUST00000158022 94 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm3715-201ENSMUST00000172308 617 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm3351-201ENSMUST00000193454 505 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm37641-201ENSMUST00000193837 239 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm42452-201ENSMUST00000199749 617 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm43992-201ENSMUST00000204358 197 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm6070-201ENSMUST00000207275 419 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Pde6aP27664 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm24200-201ENSMUST00000082955 157 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Mir3068-201ENSMUST00000083004 136 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.08□□□□□ -1.28
Pde6aP27664 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pde6aP27664 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Pde6aP27664 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Pde6aP27664 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Pde6aP27664 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Pde6aP27664 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm22371-201ENSMUST00000104588 130 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Gm12005-201ENSMUST00000121451 379 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Gm25102-201ENSMUST00000122479 112 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Pde6aP27664 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.07□□□□□ -1.28
Pde6aP27664 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm27004-201ENSMUST00000183300 727 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm37908-201ENSMUST00000195828 470 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm43090-201ENSMUST00000202459 314 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm45724-201ENSMUST00000213031 420 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 AC124356.2-201ENSMUST00000221874 336 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 AC131100.2-201ENSMUST00000227701 998 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Gm8412-201ENSMUST00000077493 440 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm28320-201ENSMUST00000187777 2273 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.07□□□□□ -1.28
Pde6aP27664 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pde6aP27664 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.06□□□□□ -1.28
Pde6aP27664 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC7.06□□□□□ -1.28
Pde6aP27664 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms