Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.92□□□□□ -1.46
Lire1P11260 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lire1P11260 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Lire1P11260 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Gm14513-201ENSMUST00000117403 123 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm12131-201ENSMUST00000117479 359 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm13641-201ENSMUST00000117993 473 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm15765-201ENSMUST00000118407 910 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Zfp389-201ENSMUST00000118425 675 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm11879-201ENSMUST00000121885 702 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm12438-201ENSMUST00000122034 336 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm25117-201ENSMUST00000157194 144 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm25717-201ENSMUST00000158631 353 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lire1P11260 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.92□□□□□ -1.46
Lire1P11260 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.92□□□□□ -1.46
Lire1P11260 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.92□□□□□ -1.46
Lire1P11260 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.92□□□□□ -1.46
Lire1P11260 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.92□□□□□ -1.46
Lire1P11260 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.92□□□□□ -1.46
Lire1P11260 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lire1P11260 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lire1P11260 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lire1P11260 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.92□□□□□ -1.46
Lire1P11260 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.92□□□□□ -1.46
Lire1P11260 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Lire1P11260 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.92□□□□□ -1.46
Lire1P11260 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lire1P11260 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
Lire1P11260 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Lire1P11260 Gm24888-201ENSMUST00000104387 130 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.91□□□□□ -1.46
Lire1P11260 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Lire1P11260 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Gm11212-201ENSMUST00000118337 618 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gm12401-201ENSMUST00000118435 228 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gm14018-201ENSMUST00000119042 455 ntBASIC5.91□□□□□ -1.46
Lire1P11260 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Lire1P11260 Gm22523-201ENSMUST00000158696 100 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gm17421-201ENSMUST00000167845 674 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Lire1P11260 Gm23968-201ENSMUST00000175047 125 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.91□□□□□ -1.46
Lire1P11260 Gm27348-201ENSMUST00000184511 170 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gm28885-201ENSMUST00000185615 563 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gm28996-201ENSMUST00000190316 721 ntBASIC5.91□□□□□ -1.46
Lire1P11260 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.91□□□□□ -1.46
Lire1P11260 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms