Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col1a1P11087 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col1a1P11087 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col1a1P11087 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col1a1P11087 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Col1a1P11087 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.8□□□□□ -1.32
Col1a1P11087 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col1a1P11087 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col1a1P11087 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col1a1P11087 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.8□□□□□ -1.32
Col1a1P11087 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col1a1P11087 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col1a1P11087 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm14382-201ENSMUST00000117374 437 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm16060-201ENSMUST00000153140 478 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm37631-201ENSMUST00000192275 364 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm45082-201ENSMUST00000206082 601 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm18468-201ENSMUST00000207321 369 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm18470-201ENSMUST00000207467 420 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm18465-201ENSMUST00000207468 369 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm18464-201ENSMUST00000207803 420 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm18458-201ENSMUST00000207908 369 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm18461-201ENSMUST00000208421 420 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm8290-201ENSMUST00000218202 477 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm5436-201ENSMUST00000058103 643 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col1a1P11087 Mir31-201ENSMUST00000083474 106 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Col1a1P11087 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Col1a1P11087 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Col1a1P11087 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Col1a1P11087 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col1a1P11087 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Col1a1P11087 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col1a1P11087 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm11774-201ENSMUST00000118601 293 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm15741-201ENSMUST00000119401 754 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm43779-201ENSMUST00000196691 829 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Gm7990-201ENSMUST00000212126 593 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 Gm18591-201ENSMUST00000220568 763 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.79□□□□□ -1.32
Col1a1P11087 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col1a1P11087 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col1a1P11087 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col1a1P11087 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.78□□□□□ -1.32
Col1a1P11087 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.78□□□□□ -1.32
Col1a1P11087 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.78□□□□□ -1.32
Col1a1P11087 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col1a1P11087 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col1a1P11087 Gm14472-201ENSMUST00000119815 282 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Gm15152-201ENSMUST00000121540 394 ntBASIC6.78□□□□□ -1.32
Col1a1P11087 Gm17907-201ENSMUST00000173150 710 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms