Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37196-201ENSMUST00000194762 906 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm7512-201ENSMUST00000195217 1170 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm45722-201ENSMUST00000213075 466 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm7570-201ENSMUST00000215246 698 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm9292-201ENSMUST00000222008 710 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 AC158521.1-202ENSMUST00000224352 645 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm24411-201ENSMUST00000083428 131 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Dennd6a-204ENSMUST00000224248 2775 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Hmgb3O54879 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm25785-201ENSMUST00000104129 125 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm11561-201ENSMUST00000117429 417 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm7058-201ENSMUST00000119209 902 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm15153-201ENSMUST00000119867 274 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm13214-201ENSMUST00000122137 408 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm17048-201ENSMUST00000179266 847 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Ighv8-3-201ENSMUST00000194985 295 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 AC122844.1-201ENSMUST00000195971 107 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm3544-201ENSMUST00000196129 305 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm7166-201ENSMUST00000199715 303 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm19092-201ENSMUST00000209036 969 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 AC151904.5-201ENSMUST00000218975 549 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 AC159208.1-201ENSMUST00000221403 649 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm10095-201ENSMUST00000222765 483 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Hmgb3O54879 AC166358.5-201ENSMUST00000220706 1302 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.63□□□□□ -1.67
Hmgb3O54879 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Gm42508-201ENSMUST00000199972 3292 ntBASIC4.63□□□□□ -1.67
Hmgb3O54879 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hmgb3O54879 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hmgb3O54879 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hmgb3O54879 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hmgb3O54879 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hmgb3O54879 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.62□□□□□ -1.67
Hmgb3O54879 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hmgb3O54879 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.62□□□□□ -1.67
Hmgb3O54879 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hmgb3O54879 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms