Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm14869-201ENSMUST00000119007 884 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm13207-201ENSMUST00000119862 773 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm12654-201ENSMUST00000120387 587 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm26023-201ENSMUST00000122722 313 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm25962-201ENSMUST00000157173 168 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm16236-201ENSMUST00000159588 379 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm17047-201ENSMUST00000167709 430 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm3585-201ENSMUST00000173438 875 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm23639-201ENSMUST00000175078 132 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm18342-201ENSMUST00000186987 694 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm2427-201ENSMUST00000189121 881 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm7897-201ENSMUST00000193981 554 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Ighv1-41-201ENSMUST00000194414 329 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm20690-202ENSMUST00000195126 355 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm43108-201ENSMUST00000200525 293 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm9245-201ENSMUST00000200528 983 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm44380-201ENSMUST00000203125 293 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm44225-201ENSMUST00000203582 186 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm18691-201ENSMUST00000203593 872 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm44590-201ENSMUST00000206161 391 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm4822-201ENSMUST00000077551 479 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdh1F7BJK1 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm43335-201ENSMUST00000198299 3276 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm9314-201ENSMUST00000199881 1528 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Mir688-201ENSMUST00000102055 75 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm22774-201ENSMUST00000102084 109 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm12643-201ENSMUST00000116078 374 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm14870-201ENSMUST00000118414 156 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm12331-201ENSMUST00000119927 622 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm11581-201ENSMUST00000122024 763 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm17212-201ENSMUST00000166666 259 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC6□□□□□ -1.45
Pcdh1F7BJK1 Gm18848-201ENSMUST00000182069 792 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Pea15b-201ENSMUST00000182806 387 ntBASIC6□□□□□ -1.45
Pcdh1F7BJK1 Mir7029-201ENSMUST00000184777 61 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms