Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Mir546-201ENSMUST00000102105 121 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm14375-201ENSMUST00000119490 855 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm13024-201ENSMUST00000121756 718 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm23757-201ENSMUST00000158353 100 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm27998-201ENSMUST00000184902 361 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm37196-201ENSMUST00000194762 906 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm35013-201ENSMUST00000197218 832 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm42581-201ENSMUST00000201774 966 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm45722-201ENSMUST00000213075 466 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm18955-201ENSMUST00000223173 649 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm8256-203ENSMUST00000228692 591 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm22351-201ENSMUST00000083925 107 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm13770-201ENSMUST00000117149 305 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm7571-201ENSMUST00000120252 927 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm7931-201ENSMUST00000121537 271 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm25782-201ENSMUST00000122526 289 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm4322-201ENSMUST00000191094 336 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm37189-201ENSMUST00000192131 298 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Gm8137-201ENSMUST00000218997 463 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Lima1Q9ERG0 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lima1Q9ERG0 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.64□□□□□ -1.51
Lima1Q9ERG0 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms