Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm42967-201ENSMUST00000198647 2312 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm11821-201ENSMUST00000117335 979 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm12102-201ENSMUST00000118251 604 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm6808-201ENSMUST00000162341 807 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm26455-201ENSMUST00000175300 92 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm5974-201ENSMUST00000181607 986 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm27348-201ENSMUST00000184511 170 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm34768-201ENSMUST00000193884 565 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm9632-201ENSMUST00000195934 643 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm4083-201ENSMUST00000207158 451 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm45782-201ENSMUST00000212670 366 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 AC158981.3-202ENSMUST00000228906 523 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm25133-201ENSMUST00000082647 130 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm24921-201ENSMUST00000083024 107 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm2065-201ENSMUST00000194697 2757 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.35□□□□□ -1.23
Clp1Q99LI9 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Clp1Q99LI9 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Mir669d-2-201ENSMUST00000116854 86 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm12077-201ENSMUST00000117049 364 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm12242-201ENSMUST00000118824 738 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm12135-201ENSMUST00000119170 466 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm6568-201ENSMUST00000122274 697 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Magea9-ps-201ENSMUST00000140655 732 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Magea9-ps-202ENSMUST00000167328 899 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm28597-201ENSMUST00000187664 666 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm21715-201ENSMUST00000191056 694 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm18691-201ENSMUST00000203593 872 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.34□□□□□ -1.23
Clp1Q99LI9 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.34□□□□□ -1.23
Clp1Q99LI9 AC137871.2-201ENSMUST00000226482 289 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms