Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm28227-201ENSMUST00000186862 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28796-201ENSMUST00000186905 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29659-201ENSMUST00000187063 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28473-201ENSMUST00000187325 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28558-201ENSMUST00000187373 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28682-201ENSMUST00000187430 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28738-201ENSMUST00000187480 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28949-201ENSMUST00000187805 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28773-201ENSMUST00000187925 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29319-201ENSMUST00000188060 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29422-201ENSMUST00000188062 694 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28734-201ENSMUST00000188104 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28787-201ENSMUST00000188357 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29312-201ENSMUST00000188724 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29451-201ENSMUST00000188862 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29637-201ENSMUST00000188877 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29033-201ENSMUST00000189114 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29614-201ENSMUST00000189263 694 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28751-201ENSMUST00000189287 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29559-201ENSMUST00000189412 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28272-201ENSMUST00000189512 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28483-201ENSMUST00000189519 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28123-201ENSMUST00000189725 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28368-201ENSMUST00000189804 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29119-201ENSMUST00000189973 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28716-201ENSMUST00000190217 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29239-201ENSMUST00000190304 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28837-201ENSMUST00000190397 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28968-201ENSMUST00000190413 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28531-201ENSMUST00000190529 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm28165-201ENSMUST00000190669 694 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29107-201ENSMUST00000190910 347 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm29181-201ENSMUST00000191288 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm38229-201ENSMUST00000191931 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm32347-201ENSMUST00000192944 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm38121-201ENSMUST00000193213 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm38035-201ENSMUST00000194427 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm38350-201ENSMUST00000194789 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm37990-201ENSMUST00000195821 696 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm6649-201ENSMUST00000199743 1165 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm44147-201ENSMUST00000204658 94 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 AC122301.1-201ENSMUST00000219625 507 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 Gm38264-201ENSMUST00000194850 2032 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 AC144772.1-201ENSMUST00000226372 2398 ntBASIC7.08□□□□□ -1.28
Ccdc9Q8VC31 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm25595-201ENSMUST00000102273 97 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm23748-201ENSMUST00000104227 131 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm22523-201ENSMUST00000158696 100 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm6434-201ENSMUST00000163316 372 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm37173-201ENSMUST00000194498 1017 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm43141-201ENSMUST00000199695 274 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm45870-201ENSMUST00000211269 601 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm22155-201ENSMUST00000083836 162 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm37628-201ENSMUST00000194644 5440 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Gm6645-201ENSMUST00000118505 2726 ntBASIC7.07□□□□□ -1.28
Ccdc9Q8VC31 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc9Q8VC31 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC7.06□□□□□ -1.28
Ccdc9Q8VC31 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc9Q8VC31 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms