Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm24041-201ENSMUST00000083115 156 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12106-201ENSMUST00000116006 1200 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm25846-201ENSMUST00000158013 135 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm27804-201ENSMUST00000185135 119 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37716-201ENSMUST00000193553 947 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm4332-201ENSMUST00000196114 346 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm19092-201ENSMUST00000209036 969 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm33178-201ENSMUST00000212090 257 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.74□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12985-201ENSMUST00000118376 183 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm11699-201ENSMUST00000119016 401 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12110-201ENSMUST00000121601 579 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm11679-201ENSMUST00000121830 779 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm24239-201ENSMUST00000157791 255 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm29124-201ENSMUST00000186576 452 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm29161-201ENSMUST00000188250 699 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Gm7181-201ENSMUST00000202197 434 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.73□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms