Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm4914-201ENSMUST00000119757 459 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm5401-201ENSMUST00000122444 365 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm24065-201ENSMUST00000157487 264 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm23050-201ENSMUST00000158775 165 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm25445-201ENSMUST00000158996 299 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm26057-201ENSMUST00000178099 165 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm27849-201ENSMUST00000183673 125 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm29489-201ENSMUST00000188934 324 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm37517-201ENSMUST00000194004 1289 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm26067-201ENSMUST00000103789 110 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm25345-201ENSMUST00000104505 133 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm6754-201ENSMUST00000117124 913 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm5418-201ENSMUST00000206932 528 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.88□□□□□ -1.31
Nup88Q8CEC0 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm15074-201ENSMUST00000117603 936 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm8501-201ENSMUST00000117684 432 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm5073-201ENSMUST00000118222 820 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm13493-201ENSMUST00000120318 493 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm13489-201ENSMUST00000121234 971 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm8761-201ENSMUST00000121507 955 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm22636-201ENSMUST00000158142 275 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm24081-201ENSMUST00000175177 125 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm24957-201ENSMUST00000179604 132 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm28973-201ENSMUST00000189310 613 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm42776-201ENSMUST00000198031 406 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm5229-201ENSMUST00000039375 354 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Nup88Q8CEC0 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms