Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm22952-201ENSMUST00000116720 120 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm14267-201ENSMUST00000119751 496 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm13493-201ENSMUST00000120318 493 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Snora47-201ENSMUST00000157483 138 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm23279-201ENSMUST00000157912 97 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm23896-201ENSMUST00000158109 130 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm28885-201ENSMUST00000185615 563 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm38574-201ENSMUST00000211855 640 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm18591-201ENSMUST00000220568 763 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm5229-201ENSMUST00000039375 354 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lrif1Q8CDD9 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Mir546-201ENSMUST00000102105 121 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm26300-201ENSMUST00000102282 94 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm12189-201ENSMUST00000119779 912 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm8317-201ENSMUST00000121261 471 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm14587-201ENSMUST00000121714 658 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm11679-201ENSMUST00000121830 779 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm24383-201ENSMUST00000122691 333 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm22160-201ENSMUST00000158405 328 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm17137-202ENSMUST00000165729 957 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm8032-201ENSMUST00000171009 574 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Mir7072-201ENSMUST00000184542 60 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm29509-201ENSMUST00000185716 321 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm28996-201ENSMUST00000190316 721 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm18407-201ENSMUST00000192126 790 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm8930-201ENSMUST00000201693 768 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm45722-201ENSMUST00000213075 466 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm8137-201ENSMUST00000218997 463 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm17165-201ENSMUST00000096155 493 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lrif1Q8CDD9 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Lrif1Q8CDD9 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms