Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mir700-201ENSMUST00000102169 79 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm25564-201ENSMUST00000104604 132 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm14382-201ENSMUST00000117374 437 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm12073-201ENSMUST00000117382 524 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm13428-201ENSMUST00000117540 365 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm14529-201ENSMUST00000117894 406 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm19560-201ENSMUST00000177510 514 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm21756-201ENSMUST00000178380 930 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm21405-201ENSMUST00000179024 930 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm21191-201ENSMUST00000186484 930 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm29503-201ENSMUST00000191044 930 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm4332-201ENSMUST00000196114 346 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm32158-201ENSMUST00000200135 404 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm3785-201ENSMUST00000221000 202 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm9292-201ENSMUST00000222008 710 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm10145-201ENSMUST00000077776 462 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Vaultrc5-201ENSMUST00000083211 143 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm23456-201ENSMUST00000083335 137 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm10705-201ENSMUST00000098980 461 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm44043-201ENSMUST00000203426 3253 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm37140-201ENSMUST00000192914 1684 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm15279-201ENSMUST00000155593 288 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm16139-201ENSMUST00000160015 420 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm26738-201ENSMUST00000181312 601 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Mir6952-201ENSMUST00000185092 61 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm37203-201ENSMUST00000191618 385 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm19739-201ENSMUST00000195941 153 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm42581-201ENSMUST00000201774 966 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm45850-201ENSMUST00000212536 338 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 n-R5s180-201ENSMUST00000082770 106 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Vps53Q8CCB4 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms