Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm25971-201ENSMUST00000158953 286 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm18444-201ENSMUST00000191239 629 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm37341-201ENSMUST00000194680 371 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Ighv8-1-201ENSMUST00000194897 291 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm29736-201ENSMUST00000198189 385 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm44809-201ENSMUST00000208305 993 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm23624-201ENSMUST00000082463 321 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm24454-201ENSMUST00000083349 132 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm23058-201ENSMUST00000093703 107 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim9Q8C7M3 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.55□□□□□ -1.36
Trim9Q8C7M3 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm12586-201ENSMUST00000117328 1316 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm22371-201ENSMUST00000104588 130 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm13835-201ENSMUST00000118459 685 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm13924-201ENSMUST00000119899 486 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm14970-201ENSMUST00000122289 355 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm15300-201ENSMUST00000122324 279 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm12998-201ENSMUST00000122445 789 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm24741-201ENSMUST00000158857 106 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm17137-202ENSMUST00000165729 957 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm20453-201ENSMUST00000173968 226 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm3351-201ENSMUST00000193454 505 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm37177-201ENSMUST00000193768 417 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm19033-201ENSMUST00000208516 964 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm5374-202ENSMUST00000222910 314 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 AC134335.1-201ENSMUST00000227626 329 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.54□□□□□ -1.36
Trim9Q8C7M3 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim9Q8C7M3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.53□□□□□ -1.36
Trim9Q8C7M3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms