Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Mir92b-201ENSMUST00000102300 83 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm23948-201ENSMUST00000104030 132 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm23537-201ENSMUST00000157536 330 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm26970-201ENSMUST00000182990 964 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm18628-201ENSMUST00000220584 475 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 AC159635.1-201ENSMUST00000220905 2102 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm6620-201ENSMUST00000120113 715 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm17511-201ENSMUST00000172206 342 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Mir6343-201ENSMUST00000183584 84 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm43973-201ENSMUST00000203562 210 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Mir30b-201ENSMUST00000083542 96 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm14472-201ENSMUST00000119815 282 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm11507-201ENSMUST00000156462 412 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm18407-201ENSMUST00000192126 790 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm2531-201ENSMUST00000075609 512 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Mir342-201ENSMUST00000083502 99 ntBASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a6Q8C6K9 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.21□□□□□ -1.57
Col6a6Q8C6K9 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.21□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms