Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24273-201ENSMUST00000102332 164 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm15971-201ENSMUST00000119372 211 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm22841-201ENSMUST00000158443 62 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm24741-201ENSMUST00000158857 106 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm4373-201ENSMUST00000178571 556 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm17893-201ENSMUST00000203017 770 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 AC151904.5-201ENSMUST00000218975 549 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm9110-201ENSMUST00000219035 617 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm31711-201ENSMUST00000220687 196 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm4052-201ENSMUST00000220890 451 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm42671-201ENSMUST00000198013 1604 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm25647-201ENSMUST00000101832 78 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm25823-201ENSMUST00000101995 78 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm14202-201ENSMUST00000120121 311 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm13121-201ENSMUST00000120637 632 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm15142-201ENSMUST00000121013 856 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm13745-201ENSMUST00000121994 527 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm6058-201ENSMUST00000154261 399 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm23229-201ENSMUST00000157297 105 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm24157-201ENSMUST00000175265 111 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm24220-201ENSMUST00000177753 79 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm25988-201ENSMUST00000177759 79 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm23471-201ENSMUST00000177886 79 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm26488-201ENSMUST00000178225 79 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm23449-201ENSMUST00000179208 79 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm25221-201ENSMUST00000180051 79 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm43856-201ENSMUST00000197004 369 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm18430-201ENSMUST00000197534 682 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm43725-201ENSMUST00000200122 369 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm5154-201ENSMUST00000203971 399 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm44538-201ENSMUST00000205615 348 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm44565-201ENSMUST00000208194 269 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm7624-201ENSMUST00000209702 435 ntBASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim47Q8C0E3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms