Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm22374-201ENSMUST00000104583 132 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm15335-201ENSMUST00000122442 411 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm8032-201ENSMUST00000171009 574 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm31306-201ENSMUST00000197517 508 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Olfr467-201ENSMUST00000084756 927 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trub1Q8C0D0 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm11270-201ENSMUST00000117685 471 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm15786-201ENSMUST00000121079 450 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm12732-201ENSMUST00000121688 180 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm26069-201ENSMUST00000157497 277 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm25227-201ENSMUST00000158204 112 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm6074-201ENSMUST00000193340 451 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm17952-201ENSMUST00000193914 747 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm9278-201ENSMUST00000205508 553 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm7990-201ENSMUST00000212126 593 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm23795-201ENSMUST00000084006 137 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trub1Q8C0D0 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm11561-201ENSMUST00000117429 417 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Gm15331-201ENSMUST00000120225 385 ntBASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trub1Q8C0D0 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms