Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp47Q8BY87 CT033778.1-201ENSMUST00000224767 767 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm23686-201ENSMUST00000083241 164 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm20789-201ENSMUST00000221002 4195 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 AC154755.2-201ENSMUST00000224384 2857 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm26172-201ENSMUST00000158421 134 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm3242-201ENSMUST00000171273 485 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm4845-201ENSMUST00000179202 562 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm37336-202ENSMUST00000193705 468 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm18702-201ENSMUST00000196923 588 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm42776-201ENSMUST00000198031 406 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Glud-ps-201ENSMUST00000206310 657 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm7680-201ENSMUST00000216198 1348 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm37092-201ENSMUST00000193381 1518 ntBASIC8.12□□□□□ -1.11
Usp47Q8BY87 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp47Q8BY87 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm11227-201ENSMUST00000119774 471 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm12732-201ENSMUST00000121688 180 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm25906-201ENSMUST00000158489 126 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm37308-201ENSMUST00000194684 100 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm45525-201ENSMUST00000210800 389 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 AC122332.1-201ENSMUST00000214384 285 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm36501-201ENSMUST00000221857 745 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 AC124408.2-201ENSMUST00000228168 645 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm37738-201ENSMUST00000192396 4716 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Gm43611-201ENSMUST00000196656 4352 ntBASIC8.11□□□□□ -1.11
Usp47Q8BY87 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp47Q8BY87 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm16007-201ENSMUST00000117837 286 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm6175-201ENSMUST00000121351 400 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm3216-201ENSMUST00000166927 486 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm3141-201ENSMUST00000168726 499 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm38015-201ENSMUST00000193048 188 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm29438-201ENSMUST00000191298 2613 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms