Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm17044-201ENSMUST00000168549 828 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm27849-201ENSMUST00000183673 125 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Mir7020-201ENSMUST00000183787 70 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm38201-201ENSMUST00000192143 387 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm18748-201ENSMUST00000198507 622 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm42961-201ENSMUST00000202023 181 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm44219-201ENSMUST00000203005 273 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm44432-201ENSMUST00000203342 938 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm45596-201ENSMUST00000209279 434 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 CT030170.4-202ENSMUST00000221109 540 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm6068-201ENSMUST00000222270 387 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 n-R5s161-201ENSMUST00000083728 114 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm42894-201ENSMUST00000200788 3390 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm7205-201ENSMUST00000196032 1323 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm45172-201ENSMUST00000206054 1301 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm6125-201ENSMUST00000217983 3472 ntBASIC8.27□□□□□ -1.08
Usp40Q8BWR4 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm25564-201ENSMUST00000104604 132 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm15018-201ENSMUST00000117090 633 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm14388-201ENSMUST00000118119 477 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm6744-201ENSMUST00000119303 543 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm15227-201ENSMUST00000121844 399 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm26486-201ENSMUST00000158021 110 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm28883-201ENSMUST00000189256 369 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm44316-201ENSMUST00000199274 97 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm2287-202ENSMUST00000199619 1000 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm18689-201ENSMUST00000203969 902 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 AC102287.1-201ENSMUST00000211412 454 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 AC123832.2-201ENSMUST00000215151 129 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm6477-201ENSMUST00000217098 764 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm3785-201ENSMUST00000221000 202 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm38096-201ENSMUST00000193692 2389 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Gm43627-201ENSMUST00000197119 2299 ntBASIC8.27□□□□□ -1.09
Usp40Q8BWR4 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm11393-201ENSMUST00000118019 288 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm12757-201ENSMUST00000119465 800 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm8545-201ENSMUST00000120692 801 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm22959-201ENSMUST00000122514 303 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm25826-201ENSMUST00000157090 137 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Gm16571-201ENSMUST00000159112 291 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC8.26□□□□□ -1.09
Usp40Q8BWR4 Mir3473a-201ENSMUST00000175011 78 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms